[console_scripts]
pyobo = pyobo.cli:main
recurify = pyobo.cli:recurify

[pyobo.nomenclatures]
cgnc = pyobo.sources.cgnc:get_obo
chembl.compound = pyobo.sources.chembl:get_obo
complexportal = pyobo.sources.complexportal:get_obo
conso = pyobo.sources.conso:get_obo
covid = pyobo.sources.covid:get_obo
drugbank = pyobo.sources.drugbank:get_obo
drugbank.salt = pyobo.sources.drugbank_salt:get_obo
drugcentral = pyobo.sources.drugcentral:get_obo
eccode = pyobo.sources.expasy:get_obo
fplx = pyobo.sources.famplex:get_obo
hgnc = pyobo.sources.hgnc:get_obo
hgnc.genefamily = pyobo.sources.hgncgenefamily:get_obo
interpro = pyobo.sources.interpro:get_obo
itis = pyobo.sources.itis:get_obo
kegg.genes = pyobo.sources.kegg.genes:get_obo
kegg.genome = pyobo.sources.kegg.genome:get_obo
kegg.pathway = pyobo.sources.kegg.pathway:get_obo
mesh = pyobo.sources.mesh:get_obo
mgi = pyobo.sources.mgi:get_obo
mirbase = pyobo.sources.mirbase:get_obo
mirbase.family = pyobo.sources.mirbase_family:get_obo
mirbase.mature = pyobo.sources.mirbase_mature:get_obo
msig = pyobo.sources.msig:get_obo
ncbigene = pyobo.sources.ncbigene:get_obo
npass = pyobo.sources.npass:get_obo
pathbank = pyobo.sources.pathbank:get_obo
pfam = pyobo.sources.pfam:get_obo
pfam.clan = pyobo.sources.pfam_clan:get_obo
pid.pathway = pyobo.sources.pid:get_obo
pubchem.compound = pyobo.sources.pubchem:get_obo
reactome = pyobo.sources.reactome:get_obo
rgd = pyobo.sources.rgd:get_obo
sgd = pyobo.sources.sgd:get_obo
umls = pyobo.sources.umls:get_obo
wikipathways = pyobo.sources.wikipathways:get_obo

[pyobo.xrefs]
biomappings = pyobo.xrefdb.sources.biomappings:get_biomappings_df
cbms2019 = pyobo.xrefdb.sources.cbms2019:get_cbms2019_xrefs_df
chembl = pyobo.xrefdb.sources.chembl:get_chembl_xrefs_df
compath = pyobo.xrefdb.sources.compath:get_compath_xrefs_df
famplex = pyobo.xrefdb.sources.famplex:get_famplex_xrefs_df
gilda = pyobo.xrefdb.sources.gilda:get_gilda_xrefs_df
intact = pyobo.xrefdb.sources.intact:get_xrefs_df
ncit = pyobo.xrefdb.sources.ncit:get_ncit_xrefs_df
pubchem = pyobo.xrefdb.sources.pubchem:get_pubchem_mesh_df
wikidata = pyobo.xrefdb.sources.wikidata:get_wikidata_xrefs_df

