LICENSE
README.rst
setup.cfg
setup.py
bin/cm2export
bin/cm2plot
bin/cm2view
bin/cmonkey2
cmonkey/BSCM.py
cmonkey/__init__.py
cmonkey/cmonkey_run.py
cmonkey/config.py
cmonkey/database.py
cmonkey/datamatrix.py
cmonkey/debug.py
cmonkey/membership.py
cmonkey/meme_suite.py
cmonkey/microarray.py
cmonkey/microbes_online.py
cmonkey/motif.py
cmonkey/network.py
cmonkey/organism.py
cmonkey/patches.py
cmonkey/pssm.py
cmonkey/rsat.py
cmonkey/schedule.py
cmonkey/scoring.py
cmonkey/seqtools.py
cmonkey/set_enrichment.py
cmonkey/stringdb.py
cmonkey/thesaurus.py
cmonkey/util.py
cmonkey/weeder.py
cmonkey/weederlauncher.py
cmonkey/cmviewer/__init__.py
cmonkey/cmviewer/webapp.py
cmonkey/meme/__init__.py
cmonkey/meme/mast.py
cmonkey/meme/meme.py
cmonkey/meme/util.py
cmonkey/tools/__init__.py
cmonkey/tools/export.py
cmonkey/tools/plot_expressions.py
cmonkey/tools/plot_motif_positions.py
cmonkey/tools/plot_motifs.py
cmonkey/tools/util.py
cmonkey2.egg-info/PKG-INFO
cmonkey2.egg-info/SOURCES.txt
cmonkey2.egg-info/dependency_links.txt
cmonkey2.egg-info/not-zip-safe
cmonkey2.egg-info/requires.txt
cmonkey2.egg-info/top_level.txt
test/testutil.py