# torch installation
--extra-index-url https://download.pytorch.org/whl/cu116; sys_platform != "darwin"
albumentations>=1.3.0
Click>=8.1.3
defusedxml>=0.7.1
flask>=2.2.2
glymur>=0.11.7
imagecodecs>=2021.11.20
jupyterlab>=3.4.8
matplotlib>=3.5.3
numpy>=1.21.6, <1.24
opencv-python>=4.6.0
openslide-python>=1.2.0
pandas>=1.3.5
pillow>=9.2.0
pydicom>=2.3.0 # Used by wsidicom
pyyaml>=6.0
requests>=2.28.1
scikit-image>=0.19.3
scikit-learn>=1.0.2
scipy>=1.7.3
shapely>=1.8.5, <2.0.0 # Remove 2.0.0 once AnnotationStore is compatible
SimpleITK>=2.1.1
sphinx>=4.3.2
tifffile>=2021.11.2
torch>=1.13.0
torchvision>=0.13.0
tqdm>=4.64.1
umap-learn>=0.5.3
wsidicom>=0.3.2, <0.7.0
zarr>=2.12.0
