Metadata-Version: 2.1
Name: cleaning-scripts
Version: 0.2.25
Summary: Python scripts used in the FHIR integration pipeline to clean input data for different external sources.
Home-page: https://github.com/arkhn/cleaning-scripts
Author: Arkhn
Author-email: contact@arkhn.org
License: Apache License 2.0
Description: # cleaning-scripts
        
        
        [![Arkhn](https://img.shields.io/badge/ARKHN-CORE-000000.svg?style=for-the-badge&logo=data:image/png;base64,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)](https://arkhn.org/)
        [![GitHub license](https://img.shields.io/badge/LICENSE-APACHE2-blue.svg?style=for-the-badge)](https://github.com/arkhn/cleaning-scripts/blob/master/LICENSE)
        
        This is a repository of Python scripts used in the FHIR integration pipeline to clean input data for different external sources.
        
        ## Scripts
        
        There are 4 types of scripts:
        - `scripts/custom` User defined scripts to perform specific tasks like cleaning a Patient phone number for example
        - `scripts/utils` Basic scripts (like capitalize, test if empty, etc.)
        - `scripts/logic` (Beta) Scripts that operate like logic statement and take other scripts as argument
        
        `scripts/custom` can be extended by users, either by completing new scripts or by adding new ones when no one is addressing their needs. This is done using the API.
        
        
        ## API
        
        The API can be used either as a small web service, or directly accessed through the [Pyrog](https://github.com/arkhn/pyrog) interface.
        
        ### Manual install
        
        To set up the API:
        ```
        set GITHUB_TOKEN=<your_github_token>
        flask run
        ```
        
        Check `http://localhost:5000
        
        ### Docker
        
        ```
        docker-compose up --build
        ```
        Or
        ```
        docker build -t cleaning-scripts:latest .
        docker run -p 5000:5000 --env-file=app/.env cleaning-scripts
        ```
        
        
        ## Start contributing
        
        We have reported several issues with the label `Good first issue` which can be a good way to start! You can also join our [Slack](https://join.slack.com/t/arkhn/shared_invite/enQtNTc1NDE5MDIxMDU3LWZmMzUwYWIwN2U0NGI1ZjM2MjcwNTAyZDZhNzcyMWFiYjJhNTIxNWQ1MWY4YmRiM2VhMDY4MDkzNGU5MTQ4ZWM) to contact us if you have trouble or questions :)
        
        If you're enthusiastic about our project, :star: it to show your support! :heart:
        
        
        
        
Platform: UNKNOWN
Description-Content-Type: text/markdown
